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Arjun Arkal Rao
PBSE Grad Student, UC Santa Cruz
B.E Biotechnology, PESIT Bangalore
aarjunrao [at] soe [dot] ucsc [dot] edu

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Non-TCGA papers

  1. Krishnan, N. M., Gaur, P., Chaudhary, R., Rao, A. A. & Panda, B. COPS: A Sensitive and Accurate Tool for Detecting Somatic Copy Number Alterations Using Short-Read Sequence Data from Paired Samples. PLoS ONE 7, e47812 (2012)
  2. Pattnaik, S., Gupta, S., Rao, A. A. & Panda, B. SInC: An accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data. BMC Bioinformatics. 2014; 15: 40.

TCGA papers

  1. Michele Ceccarelli, Floris P. Barthel, Tathiane M. Malta, Thais S. Sabedot, Sofie R. Salama, Bradley A. Murray, Olena Morozova, Yulia Newton, Amie Radenbaugh, Stefano M. Pagnotta, Samreen Anjum, Jiguang Wang, Ganiraju Manyam, Pietro Zoppoli, Shiyun Ling, Arjun A. Rao, Mia Grifford, Andrew D. Cherniack, Hailei Zhang, Laila Poisson, Carlos Gilberto Carlotti Jr., Daniela Pretti da Cunha Tirapelli, Arvind Rao, Tom Mikkelsen, Ching C. Lau, W.K. Alfred Yung, Raul Rabadan, Jason Huse, Daniel J. Brat, Norman L. Lehman, Jill S. Barnholtz-Sloan, Siyuan Zheng, Kenneth Hess, Ganesh Rao, Matthew Meyerson, Rameen Beroukhim, Lee Cooper, Rehan Akbani, Margaret Wrensch, David Haussler, Kenneth D. Aldape, Peter W. Laird, David H. Gutmann, TCGA Research Network, Houtan Noushmehr, Antonio Iavarone, Roel G.W. Verhaak. Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma. Cell, 2016. Volume 164 Issue 3 pp 550-563



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